PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296118.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 341aa    MW: 36368.1 Da    PI: 5.5727
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-192373256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f+taeeAa+a++ a+++l+g+
  XP_021296118.1 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDDAARALRGA 73
                    689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGAPSSSNGV RGRKKSSSRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEEAA  60
RAYDDAARAL RGANARTNFE LPQSASSTCG NRVSLDNMEP FSFEEVCGSG SDADGFLGAL  120
KAKLLDGKGL RVLSPASCAG LQSSVASSSP HNNGNVSRES GVTTVAPQGI GNMNPVQGPV  180
NPGFSKPDPV VNLDHEHDDQ VAAGHIGVQW HQPGQSQTAS IASMMWSNEP SYEAAWGAQM  240
NQVPPNGLFN ITTCTTATST WPLSGTTEST MDLSYSDQCP IEMQMNMNGK TNMLSMPISQ  300
IDGTTEGVWP SEQQFVHSDN NGWSGANGSW DPYLYVSSVL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-19ERF family protein