PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021296073.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 450aa MW: 50822.7 Da PI: 5.6057

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021296073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.4	3e-45	89	219	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeek...ewyfFskrdkkyatgkrknratksgyWkatg 87 lppG+rF+P+deel+v+yL+kk+++k+l+ ++ikev++yk+ P++L + k + k ewyfF++r++ky +g r+nra+ +g+Wkatg XP_021296073.1 89 LPPGYRFKPRDEELLVHYLRKKAHNKPLPP-NIIKEVELYKHSPEELTRdqnnkKST---KpvtEWYFFTPRERKYCNGLRPNRAAGDGFWKATG 179 79***********************999.89**********8434332222...2455*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d++v+ +g+ vg kktLvfy+g+ pkgekt+W+mhe+ l XP_021296073.1 180 ADTSVKF-QGTIVGFKKTLVFYRGKPPKGEKTTWIMHEFVL 219 **9.999**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MEQDEQDEEG DQGYQDFVRP FTPTGQGDQG FMPPEFTSNG PGDHGDQGFV LPMFNPNGQG 60 DQGDQAFVLP RNTPNGLVIT NEKEFLDTLP PGYRFKPRDE ELLVHYLRKK AHNKPLPPNI 120 IKEVELYKHS PEELTRDQNN KKSTKPVTEW YFFTPRERKY CNGLRPNRAA GDGFWKATGA 180 DTSVKFQGTI VGFKKTLVFY RGKPPKGEKT TWIMHEFVLS NPPERKRGSK DDMRLDDWVL 240 CRLYKKHGNN TRVVTPQQDT DPDPKQEEET ATQATDCTET LEQEYGNIPP QYMLPQQTCP 300 MPPYVAYPDS TSVLPGSIPP YNAYAADSTS VLPRSMPPYN AYSDSTSGLP SSMPPYNAYL 360 DSPSGLPRFP ESLDPMLQHQ SAVFPQQAMT VYDNFIPTAA PTSSIHPHFV GHHHPLNRYQ 420 QQPFSGVPNN IKFSADDKYL LNIDFGLPNA

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MEQDEQDEEG DQGYQDFVRP FTPTGQGDQG FMPPEFTSNG PGDHGDQGFV LPMFNPNGQG  60
DQGDQAFVLP RNTPNGLVIT NEKEFLDTLP PGYRFKPRDE ELLVHYLRKK AHNKPLPPNI  120
IKEVELYKHS PEELTRDQNN KKSTKPVTEW YFFTPRERKY CNGLRPNRAA GDGFWKATGA  180
DTSVKFQGTI VGFKKTLVFY RGKPPKGEKT TWIMHEFVLS NPPERKRGSK DDMRLDDWVL  240
CRLYKKHGNN TRVVTPQQDT DPDPKQEEET ATQATDCTET LEQEYGNIPP QYMLPQQTCP  300
MPPYVAYPDS TSVLPGSIPP YNAYAADSTS VLPRSMPPYN AYSDSTSGLP SSMPPYNAYL  360
DSPSGLPRFP ESLDPMLQHQ SAVFPQQAMT VYDNFIPTAA PTSSIHPHFV GHHHPLNRYQ  420
QQPFSGVPNN IKFSADDKYL LNIDFGLPNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	9e-58	NAC family protein