PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295042.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YA
Protein Properties Length: 345aa    MW: 37842 Da    PI: 8.2748
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.77e-32186242158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg+gGrF
  XP_021295042.1 186 DEPIYVNAKQYRAILRRRQFRAKLEAQNKL-IKVRKPYLHESRHLHALKRARGNGGRF 242
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MQNLHKKDSG VSSHSMCTYV LGCSSWGNST ETHVQQSSVS ERLSLKMGVL PQQFHNTKQL  60
SFQFQDQDSS STQSTGQSYP EVASAGDSNI YGQSLISASS GGNETHGNLF GGHAKLASSL  120
GTQDCFFPPS RVDHNKSTAH IPLHYAEPYF GGAVAAAYGL QAVIHHHHMM AMLPARVPLP  180
LDLTEDEPIY VNAKQYRAIL RRRQFRAKLE AQNKLIKVRK PYLHESRHLH ALKRARGNGG  240
RFLNKTKFQE SEHIPSSHGL DMSRSTQLDL SAKISESEVH QVENYKDATS TTSCSEVTSA  300
SNSDEMFQQP DFRFSGYPSH NGGALQGHGG NMHGGGNLHH LSGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-74NF-YA family protein