PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294904.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 243aa    MW: 26669.6 Da    PI: 8.689
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-202474256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g+
  XP_021294904.1 24 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAAREFRGA 74
                    69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAPREKTAVV KGNGNVNGNS KEVHFRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
ARAYDTAARE FRGAKAKTNF PLPCENLTNG NNCTDNDIKN NNNNQSPSQS STVESSSREA  120
SLMIYSSPLD LNLGHAAVTG FETPAVRFPF QQVSPVAGVF AAGLPAVASP QLFYFDSFVR  180
PGAMKGQQYQ RMRFDHNDFH ATFNGGVQSD SDSSSVVDLN HHEIKQRPLL NIDLNQPAVP  240
EIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-28ERF family protein