PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294136.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 311aa    MW: 35393 Da    PI: 9.7748
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.12.6e-30622001128
             NAM   1 lppGfrFhPtdeelvveyLkkk.vegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgy 82 
                     lp G++F+Ptd+ l   +L+++ +  +k    ++++   ++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +
  XP_021294136.1  62 LPXGVKFDPTDQKLE--HLEQRyIYMRKlhxlIDEFIPtLEGEnGICYTHPERLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdedgsETR 153
                     699*********995..6766623333344333333322444446**********.555666777******************744446555788 PP

             NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_021294136.1 154 WHKTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 200
                     ************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MTWCNNXDDD RALQLVTAAA STKETASVSD TKTXIFRIII CPSCGHNIPY QDQAGIHDLP  60
GLPXGVKFDP TDQKLEHLEQ RYIYMRKLHX LIDEFIPTLE GENGICYTHP ERLPGVSKDG  120
QIRHFFHRPS KAYTTGTRKR RKVHTDEDGS ETRWHKTGKT RPVLVGGAVK GFKKILVLYT  180
NYGRQRKPEK TNWVMHQYHL GNNEEEKDGE LVASKVFYQT QPRQCGPSSV KDALNRKLKN  240
RSRHDQSPIP KSSSTALVHE YFNPPFIPFD HGSHNRESPP PLIPNLVVQG DGSSFIRLAS  300
DTSKGRLERK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-115NAC family protein