PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293571.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 251aa    MW: 26873.8 Da    PI: 6.3921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002795117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_021293571.1  95 FSCNYCRRKFYSSQALGGHQNAH 117
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MTPPNPGLES ENDSEASSQV ASNISAQEAT PDASKDSTTT TSCLTNLIKA QPETGSVSLD  60
LTLHFSATDA EMKGTGDTSS EIASHGLSAT IPRVFSCNYC RRKFYSSQAL GGHQNAHKRE  120
RTMAKRAMRM GIFSDRCTSL ASLPLHGSTL RSLGIKAHSA MHQGIISSQR PIDTRAGARF  180
DQGYFGTPMF MEDDDVDLFW PGSFRQVNEG VSGNPALEFA PNSTQSSNTG FVAMASPPRT  240
DSSSPDLTLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-49C2H2 family protein