PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293314.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 330aa    MW: 36682.5 Da    PI: 6.6436
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.53.1e-1556105255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h+  E+rRR++iN++f+ Lr+l+P+     ++K + a+ L +++eY++ Lq
  XP_021293314.1  56 RSKHSVTEQRRRSKINERFQILRDLIPNT----DQKRDTASFLLEVIEYVQFLQ 105
                     899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MRTGKGSQEE EEYEEEEFGS RKQGPSSNQT MSVNANNNIN NTNKDGKNSD KANAIRSKHS  60
VTEQRRRSKI NERFQILRDL IPNTDQKRDT ASFLLEVIEY VQFLQEKVQK YEGSYQGWSS  120
EPTKLMPWRN SHWRVQSFVG HPQAIKNGSG PGSTFAGKFD ENNINIPPTM ITTAQDPVES  180
DHIRDATSKG MDQQLELANK GMALPIRGDN VLVHPLQRPV SEAQSTECLI NSDTLNQQDD  240
LTIDGGRISI SSVYSQGLLN SLTQALQSTG LDLSQANISV QIDLGKRANR GLTSGTSAKD  300
PQDSPNQAMT HLRDVSSGEE SDHAKKRLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-118bHLH family protein