PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290352.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 733aa MW: 81722 Da PI: 6.7171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.5e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290352.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE 180 DIQVSLEGKK AEASCSSSME TMNTNGVAAT VTQTQPMVHN SFAMSQAYVE SKEVTETKAL 240 VAELCQHFYP LGWLSGTGGS ITIRVHDGSI PRQHQLIVMS PSGVQKERMV ADGMYVLSSD 300 GFIMSTPSLK LYPYQPPKCT DCAPLFMKVY EICNAGAVIH SHGLEACLVT MINPFSKEFR 360 ITHMEMIKGI QGHGYHDELV VPIIENTAHE GELTESLTEA MRAYPKTTAI LVRNHGVYIW 420 GDSWISTKTQ AECYHYLFDA AIKLYQLGLD WSSPNHGPLR SINGLWGCSG NSSRGPKVGT 480 FGLDYMIEPS QRCLLLTIEG TVTPMSFVTD ILFPYAHDNV QKHLAMTYDS EETQHDIDLL 540 RSQIQEDLEQ GVAGAVPIPP DYVGKELVIA SLAANVEAMI STDRKVTSLK QLEGHIWRAG 600 FQSNELVGVV FEDVPEALEK WHASGTKVYI FANGSREVQQ LLFANSNYGD LRKYLCGFFD 660 TTVGNKQVAR SYFEILQTVG VDRPADMLFV TDSFQEAVAA RAAGLEVIIS IRPGNGPLPQ 720 NHGFRTIASL LEI

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE  180
DIQVSLEGKK AEASCSSSME TMNTNGVAAT VTQTQPMVHN SFAMSQAYVE SKEVTETKAL  240
VAELCQHFYP LGWLSGTGGS ITIRVHDGSI PRQHQLIVMS PSGVQKERMV ADGMYVLSSD  300
GFIMSTPSLK LYPYQPPKCT DCAPLFMKVY EICNAGAVIH SHGLEACLVT MINPFSKEFR  360
ITHMEMIKGI QGHGYHDELV VPIIENTAHE GELTESLTEA MRAYPKTTAI LVRNHGVYIW  420
GDSWISTKTQ AECYHYLFDA AIKLYQLGLD WSSPNHGPLR SINGLWGCSG NSSRGPKVGT  480
FGLDYMIEPS QRCLLLTIEG TVTPMSFVTD ILFPYAHDNV QKHLAMTYDS EETQHDIDLL  540
RSQIQEDLEQ GVAGAVPIPP DYVGKELVIA SLAANVEAMI STDRKVTSLK QLEGHIWRAG  600
FQSNELVGVV FEDVPEALEK WHASGTKVYI FANGSREVQQ LLFANSNYGD LRKYLCGFFD  660
TTVGNKQVAR SYFEILQTVG VDRPADMLFV TDSFQEAVAA RAAGLEVIIS IRPGNGPLPQ  720
NHGFRTIASL LEI