PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021288149.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

STAT

Protein Properties

Length: 637aa MW: 71134.2 Da PI: 6.278

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021288149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	180.6	2.1e-56	151	272	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 ldvvllna+gqpv+k++evvasLlya + ++vek++d+eapLL+sydG+efss+drp+kll+Grasfklkis+Lssk++nr f+ikf i k++ y XP_021288149.1 151 LDVVLLNAFGQPVNKELEVVASLLYAHNRSPVEKTNDEEAPLLASYDGIEFSSSDRPSKLLNGRASFKLKISKLSSKSENRQFCIKFGISKFEGY 245 8******************************************************************************************** PP STAT 96 pfleavskpirCisrsrntrsssltkk 122 +fle +s +irC+sr+r+ r+s+ ++k XP_021288149.1 246 HFLEDFSPSIRCVSRNRTPRTSTGIWK 272 *******************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MLLPLTCLHN EVPDPGNAAL STEVLKVSTQ IEYPQYKWIH VAYEVSADFL RLHINAEIAG 60 ELQLSSLLNK GSMQNGLRKT TVVGITGGND FQGYIHDAKV LPSTLSIKDQ YVQNPPLQLS 120 IDESSASDIE EDNGFWNIVG GKASCRRIFS LDVVLLNAFG QPVNKELEVV ASLLYAHNRS 180 PVEKTNDEEA PLLASYDGIE FSSSDRPSKL LNGRASFKLK ISKLSSKSEN RQFCIKFGIS 240 KFEGYHFLED FSPSIRCVSR NRTPRTSTGI WKKTTAVHPL NGSQSFGLDD ASLELKHNTV 300 HEAKLSPTSK RVRSGEAKIS TIDQLGEECN SLAWTANQVE NGYGSSMEAR PENFEEVDNS 360 LSDSESTGAR ASALKSVSST AHSVSDLTIF RYCLGGLTDR SLLLKEIATN ASDEEISGFA 420 SQVSLYSGCS HHRHQIKITK RLIEEGTKAW NMLSQNNIQV QWESAVFEIE EQFMKIARCS 480 TRSLTQQDFE LLRKIAGCRD FMAQENFEKM WCWLYPVAFT LSSDWINALW NSTSPKWIEG 540 FITKEEAELS LQGPRGLQEP GTFMLRFPTS RSWPHPDAGS LIVTYVGSDY TLHHRLLSLD 600 NVYSSGVREM NAKVKPLQDM LLAEPELSRL GRIIRSH

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MLLPLTCLHN EVPDPGNAAL STEVLKVSTQ IEYPQYKWIH VAYEVSADFL RLHINAEIAG  60
ELQLSSLLNK GSMQNGLRKT TVVGITGGND FQGYIHDAKV LPSTLSIKDQ YVQNPPLQLS  120
IDESSASDIE EDNGFWNIVG GKASCRRIFS LDVVLLNAFG QPVNKELEVV ASLLYAHNRS  180
PVEKTNDEEA PLLASYDGIE FSSSDRPSKL LNGRASFKLK ISKLSSKSEN RQFCIKFGIS  240
KFEGYHFLED FSPSIRCVSR NRTPRTSTGI WKKTTAVHPL NGSQSFGLDD ASLELKHNTV  300
HEAKLSPTSK RVRSGEAKIS TIDQLGEECN SLAWTANQVE NGYGSSMEAR PENFEEVDNS  360
LSDSESTGAR ASALKSVSST AHSVSDLTIF RYCLGGLTDR SLLLKEIATN ASDEEISGFA  420
SQVSLYSGCS HHRHQIKITK RLIEEGTKAW NMLSQNNIQV QWESAVFEIE EQFMKIARCS  480
TRSLTQQDFE LLRKIAGCRD FMAQENFEKM WCWLYPVAFT LSSDWINALW NSTSPKWIEG  540
FITKEEAELS LQGPRGLQEP GTFMLRFPTS RSWPHPDAGS LIVTYVGSDY TLHHRLLSLD  600
NVYSSGVREM NAKVKPLQDM LLAEPELSRL GRIIRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein