PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286329.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 406aa MW: 42907.2 Da PI: 6.9209

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66.1	6e-21	306	368	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN L++e++++k e+++l +e+ XP_021286329.1 306 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENANLRSEVNRIKCEYEQLVAEN 368 89********************************************************98887 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGSSEMDKTA KEKEPKTPPA TTTQEPSSTT NSGTVNADWS GFQAYSPIPP HGFLASSPQA 60 PPYMWGVQHL VPPYGTPPHP YVAMYPHGGI YAHPSIPPGS YPFSPFAMPS PNGIVEASGN 120 TSGTMETDGK PSDVKEKLPI KRSKGSLGSL NMITGKNNNL GKTSGASANG VYSKSAESGS 180 EGTSEGSDAN SQSDSQLKSG GRQDSGEGEA SQNGSAAHGP QNGGPNAPHT MVNTAMAVVP 240 ISTAGAPTAV PGPTTNLHIG MDYWGTPASS AVPAMRGKVP STAVAGGIVT PASRDSVQSQ 300 LWLQDERELK RQRRKQSNRE SARRSRLRKQ AECDELAQRA EALKEENANL RSEVNRIKCE 360 YEQLVAENTS LKERLGEIPG HEDLKSGRND QHTNNDGQTE LVQGSH

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGSSEMDKTA KEKEPKTPPA TTTQEPSSTT NSGTVNADWS GFQAYSPIPP HGFLASSPQA  60
PPYMWGVQHL VPPYGTPPHP YVAMYPHGGI YAHPSIPPGS YPFSPFAMPS PNGIVEASGN  120
TSGTMETDGK PSDVKEKLPI KRSKGSLGSL NMITGKNNNL GKTSGASANG VYSKSAESGS  180
EGTSEGSDAN SQSDSQLKSG GRQDSGEGEA SQNGSAAHGP QNGGPNAPHT MVNTAMAVVP  240
ISTAGAPTAV PGPTTNLHIG MDYWGTPASS AVPAMRGKVP STAVAGGIVT PASRDSVQSQ  300
LWLQDERELK RQRRKQSNRE SARRSRLRKQ AECDELAQRA EALKEENANL RSEVNRIKCE  360
YEQLVAENTS LKERLGEIPG HEDLKSGRND QHTNNDGQTE LVQGSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	329	RRSRLRK
2	323	330	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-156	bZIP family protein