PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285711.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 680aa MW: 74413.3 Da PI: 6.3739

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	421	458	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + XP_021285711.1 421 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 458 664459******************************88 PP
2	BELL	130.8	4.6e-42	283	354	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+++ag+g+akpYt+lAl++iSrhFrcL+dai +qi XP_021285711.1 283 ERQELQSKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAINGQI 354 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MATYYTGSNN QRDTAAMIYL RESMPGSYPE APVLPVNSMM YMNSGSYSDA FAGNSQQQNN 60 CIEIQAVEAS DSTSQHQEIL SNLGGSRVGE HDFGTWRDGR NEMLVMHPMG GPASFLHGGQ 120 SLQGQGLSLS LGTQIPSGIQ MPSMPYRNPN SGFASFLSPN PSLTGEGGSR NSSSRDEQSR 180 NAEYLPPGFS GGNQDSNKGD LSAYGMSSIA RTIPNSKYLK AAQQLLDEVV NVRKALKQPD 240 GEKNQSSQDR MKSSTDDDGG SKNVPSNQQE CSNNSPNEMS HAERQELQSK LTKLLSMLDE 300 VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTALALQTIS RHFRCLRDAI NGQIRATRKS 360 LGEQDTSENS KGVGITRLRY VDQQLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL 420 FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EFADAEMDSN 480 SSSENAVKAT KGDTRTSEDR GEDLQQSGSS SATERCSTGQ LMDSKSDPVS DVEMAGPSTG 540 AGFQNVSRGE TETEYGLLKL REEKRPNVDD SNLFPDAIAH SGGGNDRFMA AAAAAYHMSE 600 LGRFGSGSGV SLTLGLQHCE GGSIPMSGGS HQSFVAVRRD GIYNPAASSV GAETADFECI 660 KPGNRQHRFS SSHLLHDFVA

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MATYYTGSNN QRDTAAMIYL RESMPGSYPE APVLPVNSMM YMNSGSYSDA FAGNSQQQNN  60
CIEIQAVEAS DSTSQHQEIL SNLGGSRVGE HDFGTWRDGR NEMLVMHPMG GPASFLHGGQ  120
SLQGQGLSLS LGTQIPSGIQ MPSMPYRNPN SGFASFLSPN PSLTGEGGSR NSSSRDEQSR  180
NAEYLPPGFS GGNQDSNKGD LSAYGMSSIA RTIPNSKYLK AAQQLLDEVV NVRKALKQPD  240
GEKNQSSQDR MKSSTDDDGG SKNVPSNQQE CSNNSPNEMS HAERQELQSK LTKLLSMLDE  300
VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTALALQTIS RHFRCLRDAI NGQIRATRKS  360
LGEQDTSENS KGVGITRLRY VDQQLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL  420
FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EFADAEMDSN  480
SSSENAVKAT KGDTRTSEDR GEDLQQSGSS SATERCSTGQ LMDSKSDPVS DVEMAGPSTG  540
AGFQNVSRGE TETEYGLLKL REEKRPNVDD SNLFPDAIAH SGGGNDRFMA AAAAAYHMSE  600
LGRFGSGSGV SLTLGLQHCE GGSIPMSGGS HQSFVAVRRD GIYNPAASSV GAETADFECI  660
KPGNRQHRFS SSHLLHDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-132	TALE family protein