PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284847.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 305aa    MW: 34222.2 Da    PI: 4.5889
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.42.8e-373084660
          zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                     +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++
  XP_021284847.1 30 PNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRR 84
                    58**************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MFTVCDQMLQ CPPRPFPIDR KWKSNVELAP NCPRCASANT KFCYYNNYSL SQPRYFCKGC  60
RRYWTKGGSL RNVPVGGGCR KSRRGKFSRV EKGGHLSMNY RKNLSSFGSH QDEMIGVSSS  120
PDGDSGNQPE PSTGTDIDLA VVFAKFLNQS TSFDHPEVVT QELPNEANER IDVWSFLEQD  180
ISSQNGSSME CQKPVVPSIP ESFMLQETPQ VNQQLEETKS IEELLETNHM TAFGLPNLLA  240
DEIVQDALWS DDAASTNPNF DLQPVLQLQQ FESFPVDDQL SISANLMIEN WSSFDLSGFG  300
LFSKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.11e-41Dof family protein