PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284351.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 282aa    MW: 31569.4 Da    PI: 4.5815
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25e-154890347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      W++ E +ll++a+  +G + Wk++a+++g gRt+k+c+ ++ k+
   XP_021284351.1 48 DWSEKETLLLLEAIMHYGDD-WKKVAQHVG-GRTDKDCVAHFVKL 90
                     6*****************88.*********.**********9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
PAEFVEFPFV VQYDSTLCAR CYVRGNFRVG LSNADFRRVE ITDEPKADWS EKETLLLLEA  60
IMHYGDDWKK VAQHVGGRTD KDCVAHFVKL PFGEEFLGHP SSDEAESGFE TNKRMRLTPL  120
ADASNPIMAQ AAFLSALAGV ESAEAAARAA VTTLSEMDDN TASKGGRGSF ARNTRREADV  180
SSNGDTNPNA LERAYADVNA LLEKEERDIE RAITGVTEVQ MKEIQDKILH FEELDLQMEK  240
EFAQLEGIKN LLFVDQLNLL FRRSYALKTE ERVVENVKPN VS