PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021283010.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Protein Properties

Length: 382aa MW: 43478.9 Da PI: 7.6621

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021283010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.1e-17	19	107	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 k++++s+v +l lp +f++ h+ k + t++ledesg++++ ++i ++ + l++GWk F ++L egD++vF+l+++s+f +v + XP_021283010.1 19 MKTMVRSNVRHGFWLHLPMPFCKLHMPK--HDATVILEDESGEEYKTTYIAER----TALSAGWKAFSAGHKLVEGDVLVFHLVSSSKF--KVYI 105 699*****************999744..6679***********4444....45**********************998888..7777 PP E- CS B3 97 fr 98 +r XP_021283010.1 106 VR 107 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MERVEELQAN LAAGFPSCMK TMVRSNVRHG FWLHLPMPFC KLHMPKHDAT VILEDESGEE 60 YKTTYIAERT ALSAGWKAFS AGHKLVEGDV LVFHLVSSSK FKVYIVRAFK SNKVDGRFGS 120 LDVNVDAKPI RSVRMKRRKR TSKRAKCLEL LPLNHAQDNV ENNSLMVLDT KNERLVDQSD 180 NDSKDLSAGL FDGIRSLASI IDFNEVKSID SFVITVNGSG IDSELSEYHK IKYYELCCSQ 240 NSFLHDHLLK SISSKLAAEI ITQTVNIAEA VKGCKLSTFQ ADYSLWDKTL KGFELLGMNV 300 GFLRARLNRL KTLALELQEA VESERHRVSL EQDHMKEEKK SLEMKLVKLK EAMHRLDAEI 360 ENLKANAERH EFIFQEEVNA AW

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MERVEELQAN LAAGFPSCMK TMVRSNVRHG FWLHLPMPFC KLHMPKHDAT VILEDESGEE  60
YKTTYIAERT ALSAGWKAFS AGHKLVEGDV LVFHLVSSSK FKVYIVRAFK SNKVDGRFGS  120
LDVNVDAKPI RSVRMKRRKR TSKRAKCLEL LPLNHAQDNV ENNSLMVLDT KNERLVDQSD  180
NDSKDLSAGL FDGIRSLASI IDFNEVKSID SFVITVNGSG IDSELSEYHK IKYYELCCSQ  240
NSFLHDHLLK SISSKLAAEI ITQTVNIAEA VKGCKLSTFQ ADYSLWDKTL KGFELLGMNV  300
GFLRARLNRL KTLALELQEA VESERHRVSL EQDHMKEEKK SLEMKLVKLK EAMHRLDAEI  360
ENLKANAERH EFIFQEEVNA AW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-35	B3 family protein