PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281943.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 387aa MW: 43442.6 Da PI: 6.9963

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	185.4	1.3e-57	16	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL++kv ++++++ ++i evd++k+ePwdLpkk+k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++ XP_021281943.1 16 LPPGFRFHPTDEEIITHYLTEKVMNSNFSA-SAIGEVDLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATEAGYWKATGKDKEIYKG 109 79************************99.88***********99999*************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfykgrapkgek++Wvmheyrle XP_021281943.1 110 KGCLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 143 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MEEAIVVNKG EDLIDLPPGF RFHPTDEEII THYLTEKVMN SNFSASAIGE VDLNKCEPWD 60 LPKKAKMGEK EWYFFCQRDR KYPTGMRTNR ATEAGYWKAT GKDKEIYKGK GCLVGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLEGKFSYYN LPKGAKDEWV VCRVFHKNSG IKKPIPDHLL 180 RMNSFGDDLM DYTSLPPLMD PTYSNKAGSS FTDGQNEFKA IDTTPMPRSS EGNYPGSSNF 240 PTMNNNQNFL QAPNNHYHQT GSSIFNPQIP IQNPIFFHQG TPNSAYSHQG RTSGAAPSNY 300 STGLGGNDQA ILRALAANNS ADTRKADRQC KVEQFSSNQS MVSLSQDTGL STEINNTEIS 360 SVLSKSIELG SSKSYEDIED LGCLWDY

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MEEAIVVNKG EDLIDLPPGF RFHPTDEEII THYLTEKVMN SNFSASAIGE VDLNKCEPWD  60
LPKKAKMGEK EWYFFCQRDR KYPTGMRTNR ATEAGYWKAT GKDKEIYKGK GCLVGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLEGKFSYYN LPKGAKDEWV VCRVFHKNSG IKKPIPDHLL  180
RMNSFGDDLM DYTSLPPLMD PTYSNKAGSS FTDGQNEFKA IDTTPMPRSS EGNYPGSSNF  240
PTMNNNQNFL QAPNNHYHQT GSSIFNPQIP IQNPIFFHQG TPNSAYSHQG RTSGAAPSNY  300
STGLGGNDQA ILRALAANNS ADTRKADRQC KVEQFSSNQS MVSLSQDTGL STEINNTEIS  360
SVLSKSIELG SSKSYEDIED LGCLWDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-118	NAC family protein