PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281724.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 425aa MW: 47427.7 Da PI: 4.9812

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	199	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+ LGGse+AtPk il+lmkv+gLt++hvkSHLQkYR+ XP_021281724.1 199 KPRMRWTPELHEAFVEAVNLLGGSERATPKGILNLMKVEGLTIYHVKSHLQKYRT 253 79****************************************************8 PP
2	Myb_DNA-binding	55.2	1.6e-17	201	252	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k I + m +g+t +++ks++qky+ XP_021281724.1 201 RMRWTPELHEAFVEAVNLLGGSeraTPKGILNLMKvEGLTIYHVKSHLQKYR 252 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MKNSVSPQES SLAPCNRTLG NSFSSPSIAN NDMFASALAH DRHSQSPAFI CQPSRDAASL 60 PSIDSLYSDQ STALFNHPQE KKDVSWCIDR LQDFLDLPEN VRVPNGLLES GTGVMASEDH 120 SKRTDWQEWA DQLISVDDAL DTDWKEFLDD TNASDPKLKV LNSSGDISKQ QPQFQQNQPA 180 PHGEFSSDAY PLSTAPPTKP RMRWTPELHE AFVEAVNLLG GSERATPKGI LNLMKVEGLT 240 IYHVKSHLQK YRTARYKPES SEGTLENKMT SIGEMKSLDL KAGMGITEAL RLQMEVQKQL 300 HDQLEIQRNL QLRIEEQGRY LQMMFEKQKK MEDERSGAPS FDLDDASTPL PGLTYPSCAN 360 DKSEALEQVH TKTGIDRRNA STTEDESSQD VSRKQKALET NPAGHIEAND NEPGSPLSKR 420 ARTEK

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MKNSVSPQES SLAPCNRTLG NSFSSPSIAN NDMFASALAH DRHSQSPAFI CQPSRDAASL  60
PSIDSLYSDQ STALFNHPQE KKDVSWCIDR LQDFLDLPEN VRVPNGLLES GTGVMASEDH  120
SKRTDWQEWA DQLISVDDAL DTDWKEFLDD TNASDPKLKV LNSSGDISKQ QPQFQQNQPA  180
PHGEFSSDAY PLSTAPPTKP RMRWTPELHE AFVEAVNLLG GSERATPKGI LNLMKVEGLT  240
IYHVKSHLQK YRTARYKPES SEGTLENKMT SIGEMKSLDL KAGMGITEAL RLQMEVQKQL  300
HDQLEIQRNL QLRIEEQGRY LQMMFEKQKK MEDERSGAPS FDLDDASTPL PGLTYPSCAN  360
DKSEALEQVH TKTGIDRRNA STTEDESSQD VSRKQKALET NPAGHIEAND NEPGSPLSKR  420
ARTEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.1	9e-91	G2-like family protein