PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280893.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 316aa    MW: 35584.3 Da    PI: 5.1321
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-1978126355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_021280893.1  78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 126
                     9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MCGGAIIADF IPRKRGRNVT ASDLWPNPPF AKTNGFNSEL CQLGRGDSLA HFKGPQTQPS  60
LGVEQEDKKP KKQRKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDRE  120
ARKIRGKKAK VNFPNEDNDF SIQYNQDHFN NHEINNHNSA AAWNHNPNSN PSVYPQPCNN  180
LDNYGFGYDL NQFGGYATDP IVISGEENSV SGSEGSYSCN PNVNNGCLYG PVKVEEEDEE  240
KREEPVNRAV LQVQEENQVE KLSEELMAYE NYMKFFQIPY LDGQSMTQTV AVPPENVIGE  300
LWSFDDGGVP VTSTAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.18e-34ERF family protein