PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280490.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 484aa MW: 55144.4 Da PI: 5.1597

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	118.4	6.9e-37	11	131	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +G+rFhPtd+elv++yL +k+ +++ + ++ikev ++++ +Pw+Lp +k+k+ ++ wyfFs+r+ + kr +r+t++g+Wk tgk+++v+ XP_021280490.1 11 VGYRFHPTDKELVDHYLWNKILDRDSLV-QAIKEVdGLCRKDPWELPrlSKIKSADQVWYFFSRRKDS----KRVKRTTDKGFWKITGKTRNVKG 100 7*********************9777.8866******5449999999**99775....59***************98 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyr 127 ++ +kktLvf++gr ++++ t Wvmhey XP_021280490.1 101 --KRGSAIKKTLVFFQGRGSNAKWTPWVMHEYI 131 ..555799**********************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MGSISSNSDI VGYRFHPTDK ELVDHYLWNK ILDRDSLVQA IKEVDGLCRK DPWELPRLSK 60 IKSADQVWYF FSRRKDSKRV KRTTDKGFWK ITGKTRNVKG KRGSAIKKTL VFFQGRGSNA 120 KWTPWVMHEY IFISTVLDNK EGIYLCKLKN KEDEKADTSR SEVCEPSQVA DDGIPENSAM 180 FDPDVMLATL EEPDGRDEAD NNLSPSPQPM MREEQVPSCV DSTYLCEFSG GHCGVQHLSN 240 SNEQNDDSWT KYLVDTDEVY PDENEGCSLP FDMRMTCPGE SSRKRSRFEN GGLCEAIENE 300 ECQETYEQVV SASSMLDEHS GSKKSQAMAT VNAPNETLTS VEHDPNGRKR MLSIHNESRE 360 MDAPSGDSDV DLHCIFHVAL AESVDYPYAT RFDNPQYQER SQNLIEQEDD PKRITKQGKF 420 SVKTVSLDKA RDVKQHVTAD NLPQMENAVM ESNMKFKKAK ETNKKKSLQM HWSESAESDQ 480 RAAY

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MGSISSNSDI VGYRFHPTDK ELVDHYLWNK ILDRDSLVQA IKEVDGLCRK DPWELPRLSK  60
IKSADQVWYF FSRRKDSKRV KRTTDKGFWK ITGKTRNVKG KRGSAIKKTL VFFQGRGSNA  120
KWTPWVMHEY IFISTVLDNK EGIYLCKLKN KEDEKADTSR SEVCEPSQVA DDGIPENSAM  180
FDPDVMLATL EEPDGRDEAD NNLSPSPQPM MREEQVPSCV DSTYLCEFSG GHCGVQHLSN  240
SNEQNDDSWT KYLVDTDEVY PDENEGCSLP FDMRMTCPGE SSRKRSRFEN GGLCEAIENE  300
ECQETYEQVV SASSMLDEHS GSKKSQAMAT VNAPNETLTS VEHDPNGRKR MLSIHNESRE  360
MDAPSGDSDV DLHCIFHVAL AESVDYPYAT RFDNPQYQER SQNLIEQEDD PKRITKQGKF  420
SVKTVSLDKA RDVKQHVTAD NLPQMENAVM ESNMKFKKAK ETNKKKSLQM HWSESAESDQ  480
RAAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01550.1	2e-39	NAC family protein