PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021279697.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 441aa MW: 47223.3 Da PI: 5.6155

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021279697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.2	2.1e-14	217	272	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr+rr+ +NRe+ArrsR+RK+a + Le v +L e ++L k+l ++ ++++ XP_021279697.1 217 DAKRARRMRSNRESARRSRRRKQAHMNDLEAQVGQLRVEHSTLLKRLTDMNHKYDE 272 68******************************************888877777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MNTVFPVDDF SDPFWATPPS EAAAGMSRSQ SEWALEKFLE EFSGAGVANP GSRAGENVIG 60 PSLAAPQPSV SKAEEGDGDG DVVEIKGPNN QNHHPPPSDP TPVPIDSDEY HAILKNKLHQ 120 ACAAVAFSRA SAVKAEDSSA QAEDQALQSG SQVQGSSKAQ GQGEPDVAPS GIQAVLATQR 180 KPGVQVRQTT SGSSREDSDD DELEGDTETT ENMDPADAKR ARRMRSNRES ARRSRRRKQA 240 HMNDLEAQVG QLRVEHSTLL KRLTDMNHKY DEAAVDNRIL KADIETLRAK VKMAEETVKR 300 VTGINPVLLS RPNVPSVGMP FVSSPLEAST AAPVPLQPNT NQFFQQPVPS IAAPMHHQGV 360 DNSFRGNTLV PPIVNPQTEV GVNNVNETSA LQHTPSLERV QDQIAHGGMQ KQIGPGVSPC 420 GTMPGWEPGL AHAAAKNKKQ S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MNTVFPVDDF SDPFWATPPS EAAAGMSRSQ SEWALEKFLE EFSGAGVANP GSRAGENVIG  60
PSLAAPQPSV SKAEEGDGDG DVVEIKGPNN QNHHPPPSDP TPVPIDSDEY HAILKNKLHQ  120
ACAAVAFSRA SAVKAEDSSA QAEDQALQSG SQVQGSSKAQ GQGEPDVAPS GIQAVLATQR  180
KPGVQVRQTT SGSSREDSDD DELEGDTETT ENMDPADAKR ARRMRSNRES ARRSRRRKQA  240
HMNDLEAQVG QLRVEHSTLL KRLTDMNHKY DEAAVDNRIL KADIETLRAK VKMAEETVKR  300
VTGINPVLLS RPNVPSVGMP FVSSPLEAST AAPVPLQPNT NQFFQQPVPS IAAPMHHQGV  360
DNSFRGNTLV PPIVNPQTEV GVNNVNETSA LQHTPSLERV QDQIAHGGMQ KQIGPGVSPC  420
GTMPGWEPGL AHAAAKNKKQ S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	239	RRSRRRKQ
2	234	239	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	1e-54	bZIP family protein