PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021279401.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 273aa MW: 30629.3 Da PI: 8.8992

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021279401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.6	1.3e-13	197	246	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r rrk+kNRe+A rsR+RK+a+ eL +kv Le+eN +Lk+e ++++ XP_021279401.1 197 RRLRRKIKNRESAARSRARKQAYHNELVTKVSRLEEENIKLKEEKITIQN 246 688***************************************99666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGIQTMGSQS SGQQSHLQPS PLVRQNSWYS LTLNEVENQL GMLGKPLGSM NLDELLNNVW 60 TTESNQPLRI DTESTSSSSS LQRQASLTLA RAFSGKTVDQ VWNEIQQGQR KRFGEEMKGQ 120 EREPTLGETT LEDFLVQAGL FVADASLGAT MELDSTPKSF LPQIGLSPTP SLGTLSDTSM 180 KGRKRDSQDA LEKTIERRLR RKIKNRESAA RSRARKQAYH NELVTKVSRL EEENIKLKEE 240 KITIQNHLLK ANGDWSEGTW MRLPKGDQKD DPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-44	bZIP family protein