PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278243.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 320aa MW: 34399.2 Da PI: 9.6445

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	64	124	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkk++ XP_021278243.1 64 PEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNK 124 56789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MVFSSVPVYL DPPNWQQQTN HIQQGTGSEN PQLPPPPHHV GVGAGSIRPG SMADRARLAK 60 IPQPEVALKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN VPVGGGCRRN 120 KKNKSSSSKS SASAEKQVGN SNSTSAGNIP SEISGHLPRQ TPHLPFMASL QNFSQYGLGN 180 IGLNFGGIQG QIGATSTGAS GQADMGFQIG TNSGMSSAIF SAEGTHHQQF PFFEPANGLY 240 PFQSEGMEAS SSMVGESQLL RSMSSSSRAS QTAPVKMENN QGLNLSRQLL GVSENNQYWG 300 GNNWTDNLSG LNSSNTNHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	1e-49	Dof family protein