PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021276165.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 447aa MW: 49263.4 Da PI: 5.9723

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021276165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	385	418	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_021276165.1 385 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 418 469*****************************87 PP
2	ELK	28.7	2.9e-10	339	360	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_021276165.1 339 ELKHELKQGYKEKIVDIREEIL 360 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MAFHHNHLSQ DLPLHHFTDQ QQQQQTNQQQ QTQQLPETTA PNWLNSALLR SQQPQPPQPH 60 THFSDPNFLN LHTTTTASDS TAASQGPNQW LSRSSSSILH RNHSDVIDDV AAAAAAAAGG 120 GGDSMIAVES GDLKNSNSET MNNNNKSEGV VVESGGGGSG AGDGVVNWQN ARHKAEILAH 180 PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQHVVAKY SALGGGAQGL VGDDKELDQF 240 MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WEIEQSLQSL TGVSPGEGTG ATMSDDDEDQ 300 VDSDANLFDG SLEGPDSMGF GPLIPTESER SLMERVRQEL KHELKQGYKE KIVDIREEIL 360 RKRRAGKLPG DTTSVLKAWW QSHSKWPYPT EEDKARLVQE TGLQLKQINN WFINQRKRNW 420 HSNPSTSTVL KSKRKSNAGE NSGDQFM

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MAFHHNHLSQ DLPLHHFTDQ QQQQQTNQQQ QTQQLPETTA PNWLNSALLR SQQPQPPQPH  60
THFSDPNFLN LHTTTTASDS TAASQGPNQW LSRSSSSILH RNHSDVIDDV AAAAAAAAGG  120
GGDSMIAVES GDLKNSNSET MNNNNKSEGV VVESGGGGSG AGDGVVNWQN ARHKAEILAH  180
PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQHVVAKY SALGGGAQGL VGDDKELDQF  240
MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WEIEQSLQSL TGVSPGEGTG ATMSDDDEDQ  300
VDSDANLFDG SLEGPDSMGF GPLIPTESER SLMERVRQEL KHELKQGYKE KIVDIREEIL  360
RKRRAGKLPG DTTSVLKAWW QSHSKWPYPT EEDKARLVQE TGLQLKQINN WFINQRKRNW  420
HSNPSTSTVL KSKRKSNAGE NSGDQFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein