PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021275920.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 370aa MW: 41545 Da PI: 7.1613

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021275920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.7	2.6e-28	153	207	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW p+LHe F+ av++LGG+e AtPk+il+lm+v+gL + hvkSHLQkYRl XP_021275920.1 153 KQRIRWMPKLHELFLTAVDKLGGPESATPKNILKLMNVPGLHICHVKSHLQKYRL 207 79****************************************************8 PP
2	Myb_DNA-binding	36.8	9.1e-12	157	206	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW + ++el++ av +lGg+ t+k I + m+ g+ ++ks++qky+ XP_021275920.1 157 RWMPKLHELFLTAVDKLGGPesaTPKNILKLMNvPGLHICHVKSHLQKYR 206 9************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MEKPVGNSRC SSPLPMFDHL IPATNTHDSS LLFGEGKTTT CDKEDFENFM VFPHVPAESS 60 TVIPEHSAYP KGSLTLKEQL QLQYLTRELE IEMNGNGSEN ENPGLAETHE VPRVATVPVI 120 QLEHNRNCLS SVVNLDGCIH STHQHPEVVA ANKQRIRWMP KLHELFLTAV DKLGGPESAT 180 PKNILKLMNV PGLHICHVKS HLQKYRLAKN VSELKHDKRS SRFEEKETLT ETHGDGNIAK 240 ERDTQVLETL RMQVEVQKLL HEQLKVQREL QLQIEKQGQF LRQLMEEQKK AGSTSTPAQC 300 FPSPNNTTLI HTEMPLRSSS EAAFSQNGAK SIRDCSSIHS PKRKASETAE SEQCQKWHKG 360 ESSTKTSSPC

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MEKPVGNSRC SSPLPMFDHL IPATNTHDSS LLFGEGKTTT CDKEDFENFM VFPHVPAESS  60
TVIPEHSAYP KGSLTLKEQL QLQYLTRELE IEMNGNGSEN ENPGLAETHE VPRVATVPVI  120
QLEHNRNCLS SVVNLDGCIH STHQHPEVVA ANKQRIRWMP KLHELFLTAV DKLGGPESAT  180
PKNILKLMNV PGLHICHVKS HLQKYRLAKN VSELKHDKRS SRFEEKETLT ETHGDGNIAK  240
ERDTQVLETL RMQVEVQKLL HEQLKVQREL QLQIEKQGQF LRQLMEEQKK AGSTSTPAQC  300
FPSPNNTTLI HTEMPLRSSS EAAFSQNGAK SIRDCSSIHS PKRKASETAE SEQCQKWHKG  360
ESSTKTSSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	2e-57	G2-like family protein