PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274885.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 273aa MW: 30775.8 Da PI: 6.5156

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.3	1.7e-33	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFveav+qLGG++kAtPktil++m+vkgLtl+h+kSHLQk+Rl XP_021274885.1 30 KPRLRWTVELHERFVEAVTQLGGPDKATPKTILKAMGVKGLTLYHLKSHLQKFRL 84 79****************************************************8 PP
2	Myb_DNA-binding	69.4	5.7e-22	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av+qlGg+ t+ktI + mg kg+tl+++ks++qk++ XP_021274885.1 32 RLRWTVELHERFVEAVTQLGGPdkaTPKTILKAMGvKGLTLYHLKSHLQKFR 83 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MFHSKKPAFT TYDRLSVQGD SGLVLTTDPK PRLRWTVELH ERFVEAVTQL GGPDKATPKT 60 ILKAMGVKGL TLYHLKSHLQ KFRLGRQPQK DFNDQSVSDS RKVSEFDFSK NATGIRACCL 120 SDQSVQQTGG VGLQMEVGGI LNEELEVQKH LQMRIDTRGK YMQTILEKAA AQTLSEENTN 180 SQCYKYFGIP KYGNMGSMEN LDFVSQVNVP SLEELHSIPA SETAHMEKRW NKLNIENLES 240 PIVFWSDDLL PGNIVIATPD FNSDRDSLKD DHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-69	G2-like family protein