PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274119.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 327aa MW: 34562.4 Da PI: 8.8376

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.8e-39	59	118	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprCds ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_021274119.1 59 ENQNLRCPRCDSPNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNT 118 57899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MIQELLGGAG LIGGERKISI GGTILEGTPT ATPSPSPSSS TTSSSTTTTT NSTAPANSEN 60 QNLRCPRCDS PNTKFCYYNN YNLTQPRHFC KTCRRYWTKG GALRNVPIGG GCRKNKNTTV 120 SASVGKSSAA KMKTVASEIG RSGLGNGFDH ELQSSPILWA SPQSSHLLAL LRTTQNPNPN 180 TLSNPVSIKE EVSLLGSHMM NEPAAVSTGA LNARTLGLDP LSQVPSLGLC SPFWKNSQHQ 240 AQQHQQNNGF LPGEVQSTGI QELYQRLKSS ASYYSDSSAV VLSNVASSSS SSSILESAPV 300 AGGELGYWNP VFSSSWSDLP TTNGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	3e-33	Dof family protein