PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020704243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 243aa MW: 26802 Da PI: 9.0684 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.9 | 7.5e-11 | 105 | 149 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE+ ++ + ++lG+g W I+r + +Rt+ q+ s+ qky XP_020704243.1 105 PWSEEEHRAFLAGLEKLGKGYWCGISRNFVITRTPTQVASHAQKY 149 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRRCSHCGN NGHNLRTCRS SRSMVGGAGL RLFGVQLQLD SSAPMNKSIS LDSLCTSDYS 60 ASVSSSSSSS TSSFFCIDEA SEMVSNGSLS ESLIWKVQEK KKGVPWSEEE HRAFLAGLEK 120 LGKGYWCGIS RNFVITRTPT QVASHAQKYF LRQNSPDKTK RRTSLFDVVG SERPVQAKNS 180 SNVKDPSLLK DTPISKQALN TLSSGFIDLK FPEQEPESEQ KPNLPHRIHL HTNSSHVPDP 240 EQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 4e-46 | MYB_related family protein |