PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Trihelix | ||||||||
Protein Properties | Length: 535aa MW: 58772.9 Da PI: 7.8709 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 89.4 | 3.8e-28 | 55 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe++aL+++r++m+ ++++ lk+plWe+vs+k+ e+g+ers+k+Ckek+en+ k+yk++ke + + +t+++f+qle XP_020703638.1 55 RWPRQETMALLKIRSDMDPLFQEATLKAPLWEQVSRKLTEEGYERSAKKCKEKFENVFKYYKRTKEARAG------KTYRFFSQLE 134 8******************************************************************998......4799999998 PP | |||||||
2 | trihelix | 104.2 | 9.2e-33 | 389 | 474 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+ev+aLi++r+ me+++ ++ k+plWee+s+ m + g+ rs+k+Ckekwen+nk+ykk+ke++k+r +e+ +tcpyf+ql+a XP_020703638.1 389 RWPKSEVHALINLRSGMESKYLDSIPKGPLWEEISACMGRLGYDRSAKRCKEKWENINKYYKKVKESNKNR-PEDAKTCPYFHQLDA 474 8********************************************************************98.99999********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 535 aa Download sequence |
MQEEEGPPPS DQLAAPISVR MPPLGLGSSS ASAGNGFDEI AVERDSGCGS PAGNRWPRQE 60 TMALLKIRSD MDPLFQEATL KAPLWEQVSR KLTEEGYERS AKKCKEKFEN VFKYYKRTKE 120 ARAGKTYRFF SQLEALRSSS SSSVAGAPPL PPTIANSSAT MVNIEASSSG AAAPSPHTLL 180 SVTVRPPPPP AAGPITTTTI PPPPTDAADG PSSSSNTSSY SGTESEDEDG GEASRKRKRE 240 RREAPEGSGK MMAFFEGLIK EVMDQQETML QRFLEAIERR EQNRMIREEA WRRQEKSRIS 300 REHELVAQER AAAASRDDAI ISFLQKLTGQ KIPIPPPPQP PETTVDPAEE TPTSPPPPPR 360 PEDPDQPPKE TTLGSSSRRT IEAPILSSRW PKSEVHALIN LRSGMESKYL DSIPKGPLWE 420 EISACMGRLG YDRSAKRCKE KWENINKYYK KVKESNKNRP EDAKTCPYFH QLDALYRAKI 480 LGGSSSAGTA GQTLSTDDHQ LAISSPTAAI IKQQDDRMSF FEQGSSSASL VKKTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76890.2 | 5e-56 | Trihelix family protein |