PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020703512.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 268aa MW: 28002.4 Da PI: 9.4077

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020703512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	67	125	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +e+al+cprCds+ntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ XP_020703512.1 67 PEAALSCPRCDSNNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKR 125 67899****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MVFPSLPLYL DPPNSWNQPP PTHQPVGAGA TTSDEHQPPP PAATTGAGTS RPGSMAERAR 60 LAKIPQPEAA LSCPRCDSNN TKFCYFNNYS LSQPRHFCKT CRRYWTRGGA LRNVPVGGGC 120 RRNKRGGKSS SLTSTSTQPK LQPSKSPTST TATSAPPANL VLLSAAPPLS LLAAAPWNQL 180 QEYGYAGQGL EQWRLPYLGG MEVPAAAGMQ VPAPAAAAVT AGMYGYHEGE WSVGGGINGN 240 VGGWMSNSIT DHHALGFSGS SSAGNGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	5e-37	Dof family protein