PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703396.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 343aa MW: 38425.6 Da PI: 6.1571 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.9 | 0.00042 | 237 | 274 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A eYIk L XP_020703396.1 237 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 274 677888999*******998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MEEKSQSSNW WNTSRTSSFN CNTPTASSSL SSSAKTVASV TATSFMDSSL HFSSFSLSSS 60 SPMDWSQSLL SNSSGRAESC TFHSMLEETA TDTEEPSGIT FRDMNDPLLL ETGNCSRVTR 120 TFLLTSSSSS FFDSQQMTNY QSQMIQKQSD INQLQFTRNS NFWNASDHAA MNEMRTGFCS 180 SSDDVILKPF DLKPAGCSDQ TVMNTEAAKE KKTRYEYTMK KPRMEETPSP LPAFKVRKEK 240 LGDRITALQQ LVSPFGKTDT ASVLHEANEY IKFLYDQVNV LSTPYLKNGK LKQQRQKRSD 300 NSNDEEQDLK SRGLCLVPIA SAYSVASEIS SDFWTPTFKG TYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.3 | 5e-48 | bHLH family protein |