PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020701991.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 335aa MW: 37948.3 Da PI: 4.9039

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020701991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.7	2.5e-08	169	215	4	50
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +k+ rr ++NRe+A sR+RKk +i+ Le k k Le e ++L l XP_020701991.1 169 IKKRRRQMRNRESAMISRERKKLYIKDLEMKNKHLEIEYRRLDYALR 215 699*********************************99988876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MAEDNFANQE PNIVDDVDID VLLQRFSDDP IFDFDLDLDF DLLRESWVPG SDPPSNVFQP 60 SGSSSPVPPT SVEAPSMEPS SPDSVSSFVN YIENFLMDDV DWGEGDGGKE VGEDSGVDLF 120 AGALFDGSIS SKADVDTPES YDASTKEGHS KEKEVPEVVV VEEDDDFVIK KRRRQMRNRE 180 SAMISRERKK LYIKDLEMKN KHLEIEYRRL DYALRCYTAE NMALRRSLQF QKNRSCGASV 240 AKQESAVLFM ESLLLGSLFW FVSLVCLFLL PSLQSLKILS CSGRDLAMVV ARTKSRKSLM 300 LGKDLRLILH KLKRRCRSMK SRMKFFLFPL HAVLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	194	KKRRRQMRNRESAMISRERKKLYIK
2	171	195	KKRRRQMRNRESAMISRERKKLYIK
3	171	201	KRRRQMRNRESAMISRERKKLYIKDLEMKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	2e-10	bZIP family protein