PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020701752.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 404aa MW: 44992.9 Da PI: 8.1689

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020701752.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.9	2.7e-34	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerFveav+qLGG+ekAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_020701752.2 44 KPRLKWTPELHERFVEAVNQLGGPEKATPKTVMRLMDIPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	68.8	9.4e-22	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++v+av+qlGg+ t+kt++r m g+tl+++ks++qky+ XP_020701752.2 46 RLKWTPELHERFVEAVNQLGGPekaTPKTVMRLMDiPGLTLYHLKSHLQKYR 97 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MYHLNHGGNS LISYRTSFPA ERNLFLAAET CPGDSGLVLS TDAKPRLKWT PELHERFVEA 60 VNQLGGPEKA TPKTVMRLMD IPGLTLYHLK SHLQKYRLSK NLHVQANGAG WAMRNVIGPI 120 AAPDRTTEGS VSTVNKMNAG SHGSKPVKIS EALQMQIEVQ RRLNEQIEVQ RHLQMRIEAQ 180 GKYLQSVLEK AEITLGKQNL GTVGIEATKI QVSELVSKAS KECTNAFTGL EEIPDLHSFH 240 GNAAQFADCS VDSCLTTCEG SNMILRAYHG NLSPSTAKME KNSRLEQIQS TWCGEFLNGH 300 RIFSQTMVKD SGHGGLPVER DSIQKETAKG SNMTKACHGE REDQEAYLEQ PGNRRSSFKQ 360 RNPKMFNNYG LTCARRQLDL NVQDANNLTA PDYKEFDLNC FSWS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MYHLNHGGNS LISYRTSFPA ERNLFLAAET CPGDSGLVLS TDAKPRLKWT PELHERFVEA  60
VNQLGGPEKA TPKTVMRLMD IPGLTLYHLK SHLQKYRLSK NLHVQANGAG WAMRNVIGPI  120
AAPDRTTEGS VSTVNKMNAG SHGSKPVKIS EALQMQIEVQ RRLNEQIEVQ RHLQMRIEAQ  180
GKYLQSVLEK AEITLGKQNL GTVGIEATKI QVSELVSKAS KECTNAFTGL EEIPDLHSFH  240
GNAAQFADCS VDSCLTTCEG SNMILRAYHG NLSPSTAKME KNSRLEQIQS TWCGEFLNGH  300
RIFSQTMVKD SGHGGLPVER DSIQKETAKG SNMTKACHGE REDQEAYLEQ PGNRRSSFKQ  360
RNPKMFNNYG LTCARRQLDL NVQDANNLTA PDYKEFDLNC FSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-102	G2-like family protein