PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020701129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 127aa MW: 13731.8 Da PI: 9.8529 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 85.9 | 4.3e-27 | 18 | 110 | 14 | 99 |
NF-YC 14 tdfknhelPlarikkilkade..dvk....misaeaPvllskacelfileltlrswlha.eenkrrtlkksdiaaavtrtdifdflvdivprd 99 + + h+lPl+rikki+k+ +v+ mis eaP++lsk celfi elt rsw a + kr+tl + d+a av+ td fdflv +v r XP_020701129.1 18 SRIGPHSLPLTRIKKIMKSSAggNVSdakmMISVEAPIVLSKVCELFIEELTRRSWAAAaAQGKRKTLLHDDVAVAVNDTDNFDFLVGMVSRG 110 556679************86422332222389************************8752689************************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MRRPGVYSGM FTGVDASSRI GPHSLPLTRI KKIMKSSAGG NVSDAKMMIS VEAPIVLSKV 60 CELFIEELTR RSWAAAAAQG KRKTLLHDDV AVAVNDTDNF DFLVGMVSRG GRRRGAEEDS 120 DGVITHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 6e-16 | NF-YC family protein |