PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020700508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 21447 Da PI: 8.7593 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.3 | 1e-11 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +Er+RR+++N+ + Lr+l P + k+ + a+i A+e+Ik++q XP_020700508.1 2 SHITVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGAIEFIKEMQ 50 7999**********************9...9*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MSHITVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GAIEFIKEMQ QLLHSLETKK 60 KRKSLSPSPS PSSRPSVLQL TSPPPLASCS PFEAVKELSA CCNSSVADVE AKISGSNVIL 120 KTLSKSIPGQ VVRIISLLER EAFEILHLSI SSMEDTVLYS FVIKIGLQCK LSVEELAFEV 180 QQSFSQELLA LTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 2e-73 | bHLH family protein |