PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020700475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Dof | ||||||||
Protein Properties | Length: 206aa MW: 21898.8 Da PI: 4.8317 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 69.3 | 5.9e-22 | 3 | 41 | 23 | 61 |
zf-Dof 23 nyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 nys sqPr+fC+aCrr+Wt+GG+lrn+PvGgg+++++++ XP_020700475.1 3 NYSRSQPRHFCRACRRHWTEGGTLRNIPVGGGCKNKRRK 41 9********************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MPNYSRSQPR HFCRACRRHW TEGGTLRNIP VGGGCKNKRR KITPTATSFA AAAGGNPIAP 60 VVGELKDPIF PDILRHVLLN QPPQPPLESP SMDTMEGLFD AALSKSSLTF MEDFSGVSSG 120 LALSAGEIPF MAAASTSHQN LSGVQDVSGG CGDGFLGMMD ASAASIWVKK ETVFPASYWD 180 FWDGGAEDLN IGAVAEEIVA ETLLPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 1e-17 | Dof family protein |