PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020700144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 255aa MW: 29162.8 Da PI: 10.4581 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 74.9 | 8.1e-24 | 27 | 103 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse............dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++Lr +++ +++k+++ g++t+neva+e++++ d+kn+rRR+YD++NVL a+n+i+k +k+ei+w+g XP_020700144.1 27 WGLRRFSKI---VCQKVQSkGRTTYNEVADEIIADlatlnkssefefDEKNIRRRVYDAFNVLLAINVIAK-DKKEIHWIG 103 79*******...****9999***************************************************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MLARKKMATS WLLKNKIKKK VSRIIGWGLR RFSKIVCQKV QSKGRTTYNE VADEIIADLA 60 TLNKSSEFEF DEKNIRRRVY DAFNVLLAIN VIAKDKKEIH WIGFPNTSTK ALEDLKRRHM 120 NVTNRIHEKA NYLRELEAKA FDIRKLIVRN QHMHCSGNAS SEGVALPFLL VQTNPKATVE 180 IEISQDMQLV HFDFNGSPFS LHDEAAILKM MRCPQSAAKN QFSCSPARAL NSIRDENGKP 240 MKPASFSWNS ESLTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.1 | 3e-79 | E2F/DP family protein |