PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020700142.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | E2F/DP | ||||||||
Protein Properties | Length: 303aa MW: 34037.8 Da PI: 8.8018 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 74.5 | 1.1e-23 | 75 | 151 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse............dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++Lr +++ +++k+++ g++t+neva+e++++ d+kn+rRR+YD++NVL a+n+i+k +k+ei+w+g XP_020700142.1 75 WGLRRFSKI---VCQKVQSkGRTTYNEVADEIIADlatlnkssefefDEKNIRRRVYDAFNVLLAINVIAK-DKKEIHWIG 151 79*******...****9999***************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
METDHLVALP SGINEEKISQ RNQLYSLGEN GGAMAPSPCG SILRLSNACT QEDGNFLASE 60 NADKIKKKVS RIIGWGLRRF SKIVCQKVQS KGRTTYNEVA DEIIADLATL NKSSEFEFDE 120 KNIRRRVYDA FNVLLAINVI AKDKKEIHWI GFPNTSTKAL EDLKRRHMNV TNRIHEKANY 180 LRELEAKAFD IRKLIVRNQH MHCSGNASSE GVALPFLLVQ TNPKATVEIE ISQDMQLVHF 240 DFNGSPFSLH DEAAILKMMR CPQSAAKNQF SCSPARALNS IRDENGKPMK PASFSWNSES 300 LTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 4e-79 | E2F/DP family protein |