PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700113.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 347aa    MW: 37393.4 Da    PI: 6.1012
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-11284328755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +Er RR ri +++ +L++l+P+     +k  + +++L +A +YIk+Lq
  XP_020700113.1 284 LAERERRTRISKRLKRLQDLVPNM----DKQTNTSDMLDLALHYIKELQ 328
                     68*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDQLGSPGDG TPPTAYRPVG LTRYGSAPGS FLSSIADSII GGGDEGFRAG GSEEPVGGTF  60
FSGDSTCMTS ESCCHAASGA SSDLDRSMSG VGIYGGSYSP LEYGGCEEIA GGSHLIRHSS  120
SPAGFFTNVL VDSGLSPKGT GNFSQIGVNG TRMKRQGLSS QWSFSHQDSL SQISEDSIVE  180
MGKNINHGNS PTEVSGNFSY TYISGNTLRS SWDGSNSIVT APNKRGKDNN GDIMTNFNNL  240
ESQLGLSCTS MEMEAVEKYL NMQQDPVHRE FRAKRGCAMH PRSLAERERR TRISKRLKRL  300
QDLVPNMDKQ TNTSDMLDLA LHYIKELQSQ VQKLNEERAE CTCACKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-58bHLH family protein