PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020699304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 386aa MW: 42935.6 Da PI: 8.9049 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 74.2 | 1.4e-23 | 16 | 81 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l++k + ++v+l+++a +L v +rRRiYDi+NV+e+++++++k+kn++ w+g XP_020699304.1 16 RKQKSLGLLCSNFVSLYNKGDVDTVCLDDAAIKL---GV--ERRRIYDIVNVMESIGVLTRKAKNRYLWIG 81 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 72.2 | 5.7e-23 | 148 | 232 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse..........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL++ltq+f+kll ++++++v+l+++ak L+ + + k+RR+YDi+NVL++lnliek ++k+++rw g XP_020699304.1 148 RKEKSLGQLTQNFVKLLLTTNADMVSLDDAAKLLLGDgqnpaylrnaNA-AKVRRLYDIANVLSSLNLIEKthqsdTRKPAFRWLG 232 79*******************************************9644.79*********************9999*******87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 386 aa Download sequence |
MAEKSESGSR HHAYSRKQKS LGLLCSNFVS LYNKGDVDTV CLDDAAIKLG VERRRIYDIV 60 NVMESIGVLT RKAKNRYLWI GFKGIPITLE QLKEGTAKEH NISSLESSSA KVSDDEDDDK 120 SLDHNDDYGE GRLCITDTAA KPKCVAERKE KSLGQLTQNF VKLLLTTNAD MVSLDDAAKL 180 LLGDGQNPAY LRNANAAKVR RLYDIANVLS SLNLIEKTHQ SDTRKPAFRW LGTKGKCENG 240 VTIALPPVAQ KSGKRMFGTE LTNVEVKRAK LLSSVDNKSN KTQVLSHDLK ECNKAVQRQL 300 QGSKSFVFGP FNPPKTPKEE VIEQKFENDP DFESFASSMR PAYHSQALHD LFSHYMEAYN 360 SWFAEIAGGS GNLQQPLKKS VHIGHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48160.2 | 9e-87 | E2F/DP family protein |