PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698749.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 352aa    MW: 38623.7 Da    PI: 7.2489
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.56e-16246283136
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                     C++Cg +   Tp++Rrgp+g++tLCnaCGl ++ kg++
  XP_020698749.1 246 CHHCGISAksTPMMRRGPNGPRTLCNACGLVWANKGTM 283
                     ****977777*************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MNQNSNPAVE VKLVAAGKYP PGCRGQDSIA ARQVLASMTM PGQIDGGDVG VSSDGQGILH  60
YTREHDENNC GGVENGMDED QNGMMESEGM EGDGPSDPGH PCDPQGMIVP HGGSNQLTLS  120
FQGEVYVFDS VSPEKVQAVL LLLGGREISN SLAAFPSTAD LSTKQRSNLP HRVASLMRFR  180
EKRKERNFDK KIRYTVRKEV ALRMQRSRGQ FVSSKSKTEV VTSDVINWPN QHWDIVEKQP  240
PSAVECHHCG ISAKSTPMMR RGPNGPRTLC NACGLVWANK GTMRDLSKNP SSLIQTRLPE  300
AKDLSDSPGE ADMQPLPLAA NDKQCPNVAY FFHKHISFYL CNLLAVLLFQ PY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.25e-78GATA family protein