PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698054.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 651aa MW: 75446.8 Da PI: 7.8797 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 77.5 | 2.5e-24 | 52 | 140 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Y++YA++vGFsvrk++++ ++++i +++fvCsk g+++ + + k++ ++a+trtgC a+++ + ++dg+w+v+k++++HnHela XP_020698054.2 52 DMYCRYAHSVGFSVRKDHHSFWPNSRKIRMKDFVCSKAGFKKGLDLN-AKSKYRKANTRTGCPAMIRFSVDQDGEWKVNKCVENHNHELA 140 58*****************************************9999.8999999*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 651 aa Download sequence |
MDNVLEEMND WSEMEGFTQE PELRAGDGLQ QNTQPNFDIL SVVCNSEKEA YDMYCRYAHS 60 VGFSVRKDHH SFWPNSRKIR MKDFVCSKAG FKKGLDLNAK SKYRKANTRT GCPAMIRFSV 120 DQDGEWKVNK CVENHNHELA RPEDQHLLRS CRNITKERAF VLKSMTDAGI RTIDAFTYLA 180 DEVGGREHVG FLRRDAYNFV QRNRRCKIET GDTNSLIEIF KNRANSDNMF VWEVQYDEED 240 RLMNFFWADG VGRIEYNCFG DVIIFDTSYR LNKYNLACAP FVGVNNHWQN VLLGVAFLSE 300 ETVESFTWLF RTFLRVMGDK HPITIFTDQD QAMSRAIEIA FPQTRHRLCQ WHIMKKLPSK 360 VHCYKCNNKV RGLIYKCFSR CDSEEEFEST WTEMLNEGDL HSHVWLKELH RIRNKWSTAY 420 NKTCFNLGIL STQRSESTNN VCHGISKPTS TITECFLGLE KVMKTWRRNE KDEDFKCSQS 480 DVVPLVKSSP ILRQAARFYS RKLYSFFEEF LQGVGGMCIA QASTDLSTFF VKTVENIDQP 540 RYWTVNFDDA EGSIECSCGK FGMMGILCSH CLRVVRQIDI INIPPKYLLK RWSGRARKDL 600 YSDRPLSSMV ATGIPSDGIG SMIFKNTKLP SSNKQPEESN VHYHLLVVAE I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-101 | FAR1 family protein |