PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698027.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 427aa MW: 47255.8 Da PI: 8.6802

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698027.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.9	2.9e-10	143	183	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_020698027.2 143 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 183 788*************************9877777766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MHASRVSAFG AFDQATGFGV NDGADLSRKH LLNTKSSGNF ISDSLQFGSF SKTHTSADVT 60 PVARVSHVSF PQQKAQPTNL AQPSIGQFEN WGESNMADNS PRSDSSTDED MDDRNQRFDK 120 GQAATVAASD SSDRSKEKVG DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE 180 QELQRARQQG IFISSTGDQS HSTGGNGALA FDVEYARWLE EQNRLVNELR AAVNAHASDN 240 DLRTVVDGIM AHYEEIFRLK GNAAKADVFH MLSGMWKTPA ERCFLWLGGF RSSELLKLLV 300 NHLEPLTEQQ LMGICNLQQS SQQAEDALSQ GMEALQQSLA ETLAGALGPS GSSGNVANYM 360 GQMAMAMGKL GTLENFLRQA DNLRQQTLQQ MHRILTTRQS ARALLAISDY FSRLRALSSL 420 WLARPRE

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MHASRVSAFG AFDQATGFGV NDGADLSRKH LLNTKSSGNF ISDSLQFGSF SKTHTSADVT  60
PVARVSHVSF PQQKAQPTNL AQPSIGQFEN WGESNMADNS PRSDSSTDED MDDRNQRFDK  120
GQAATVAASD SSDRSKEKVG DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE  180
QELQRARQQG IFISSTGDQS HSTGGNGALA FDVEYARWLE EQNRLVNELR AAVNAHASDN  240
DLRTVVDGIM AHYEEIFRLK GNAAKADVFH MLSGMWKTPA ERCFLWLGGF RSSELLKLLV  300
NHLEPLTEQQ LMGICNLQQS SQQAEDALSQ GMEALQQSLA ETLAGALGPS GSSGNVANYM  360
GQMAMAMGKL GTLENFLRQA DNLRQQTLQQ MHRILTTRQS ARALLAISDY FSRLRALSSL  420
WLARPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-164	bZIP family protein