PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Dof | ||||||||
Protein Properties | Length: 247aa MW: 27385.3 Da PI: 8.1987 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 128.2 | 2.4e-40 | 40 | 101 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+al+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_020697994.1 40 PEQALRCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 101 7899******************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEISNANEQQ VMSSHGLEEL FIACRKPPAP ALEKKTRTQP EQALRCPRCD STNTKFCYYN 60 NYSLSQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKNKRSS SSSSLSSSSS SSSNSIIPSS 120 EKPQDDQTSF ISYSHGELTL AFSRQVWPSF ADHERFFLGN PNPNSGSSGG YLNFMRNGFL 180 ETSNINGYHQ INYGNNGSVV EEVEGNNPNT TERSCKMLMD IQMSNGVDGS LGMEYSSWHG 240 IINSSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-39 | Dof family protein |