PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696328.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Trihelix
Protein Properties Length: 371aa    MW: 42230.6 Da    PI: 7.0222
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696328.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix864.7e-2781162286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W ++e++ Li +rrem++ ++++k++k+lWe++s+kmr++gf rsp++C++kw+nl k++kk k++ +++    + + py+++l+
  XP_020696328.1  81 WVQEETRSLISLRREMDRLFNTSKSNKHLWEQISAKMRHKGFDRSPTMCTDKWRNLLKEFKKAKHQYRSG---GTAKLPYYKELD 162
                     ********************************************************************97...56689*****98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MSLITLEQLL REEEEVVGKG RAAYLSDKPR PIDFYKEEGR EMMIDVASNG GLPLLQQQMI  60
LAESSGEDPE VKAPKKRAET WVQEETRSLI SLRREMDRLF NTSKSNKHLW EQISAKMRHK  120
GFDRSPTMCT DKWRNLLKEF KKAKHQYRSG GTAKLPYYKE LDELLKNRSK NAASKNHMSS  180
KVDSYSQYSE KGLDDASIPY NSVEANGRSS FNLERRLDPD GHPLAITSAD AVAAGGVPPW  240
NWRDTSANGC DNHSSYGGRV IQVKCGIYAK KIGIDGSAEA IKEAIKSAFG LRTRRAFWLE  300
DEDEVVRSLD RDMPLGTYTL HLDEEDKILY SKEDFREFLL RHNWTGLREL SGFHTVDTLD  360
DLRPGAMYQG V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.11e-161Trihelix family protein