PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020696328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Trihelix | ||||||||
Protein Properties | Length: 371aa MW: 42230.6 Da PI: 7.0222 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86 | 4.7e-27 | 81 | 162 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem++ ++++k++k+lWe++s+kmr++gf rsp++C++kw+nl k++kk k++ +++ + + py+++l+ XP_020696328.1 81 WVQEETRSLISLRREMDRLFNTSKSNKHLWEQISAKMRHKGFDRSPTMCTDKWRNLLKEFKKAKHQYRSG---GTAKLPYYKELD 162 ********************************************************************97...56689*****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MSLITLEQLL REEEEVVGKG RAAYLSDKPR PIDFYKEEGR EMMIDVASNG GLPLLQQQMI 60 LAESSGEDPE VKAPKKRAET WVQEETRSLI SLRREMDRLF NTSKSNKHLW EQISAKMRHK 120 GFDRSPTMCT DKWRNLLKEF KKAKHQYRSG GTAKLPYYKE LDELLKNRSK NAASKNHMSS 180 KVDSYSQYSE KGLDDASIPY NSVEANGRSS FNLERRLDPD GHPLAITSAD AVAAGGVPPW 240 NWRDTSANGC DNHSSYGGRV IQVKCGIYAK KIGIDGSAEA IKEAIKSAFG LRTRRAFWLE 300 DEDEVVRSLD RDMPLGTYTL HLDEEDKILY SKEDFREFLL RHNWTGLREL SGFHTVDTLD 360 DLRPGAMYQG V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13450.1 | 1e-161 | Trihelix family protein |