PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 28218.9 Da PI: 4.6702 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.3 | 3.6e-15 | 57 | 102 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +Er+RR+++N+++ Lr+++P+ +K++Ka+i++ A+eYI++Lq XP_020695652.1 57 NIVMERNRRKKLNDRLYALRSVVPNI-----TKMDKASIVKDAIEYIQQLQ 102 5679*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MDDMDADYDN YWDTKLFWDG EELNSWGGLD EPFSSYDSSS PECAISPTSS SSAAAKNIVM 60 ERNRRKKLND RLYALRSVVP NITKMDKASI VKDAIEYIQQ LQREEKQLLE EVGEMESGHR 120 EGKMSSSIND EIARENEMIS PRKKRKMSPC SPGGGQSIEA LELSVCEVGE RTLVVSISCN 180 KKRHTMMKVC EIFESLNLRI ITASFTSVSG TLLHTLFIET DEGTNGEALK EKIEMAIAEM 240 NVPRSPVSCV SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-55 | bHLH family protein |