PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 240aa MW: 27313.5 Da PI: 4.6347 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.2e-21 | 34 | 87 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++ eLAkklgL+ rqV vWFqNrRa++k XP_020695270.1 34 KKRRLTPEQVHLLERSFEAENKLEPEKKSELAKKLGLQPRQVAVWFQNRRARWK 87 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 133.1 | 1e-42 | 33 | 124 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFe+e+kLepe+K+ela++LglqprqvavWFqnrRAR+ktkqlE+dye+Lk++ydal +++++L k+++ Lr+++ XP_020695270.1 33 EKKRRLTPEQVHLLERSFEAENKLEPEKKSELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYERLKASYDALLADHDTLLKDNDCLRSQVI 124 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MLSLEEGAHK RRPFFTTAEE LLEEEYYDEQ LPEKKRRLTP EQVHLLERSF EAENKLEPEK 60 KSELAKKLGL QPRQVAVWFQ NRRARWKTKQ LERDYERLKA SYDALLADHD TLLKDNDCLR 120 SQVISLTEKL REKELEVAVK ELDSDIEKTA IEGQPSPPSM EMLATLQQRG GDRLSTGSRG 180 STVVDGQGPP ALPVADSSVD SYFQESLIEG GGCTSDDGCS YLPGDIFQNA SHADNWWVWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 90 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-60 | HD-ZIP family protein |