PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020694195.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 250aa MW: 28290.9 Da PI: 8.8721 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.3 | 7.5e-17 | 179 | 213 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C + Tp+WR gp g+ktLCnaCG+++++ +l XP_020694195.1 179 CSHCLSQRTPQWRTGPLGPKTLCNACGVRFKSGRL 213 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MDVYGKAKVP GEVSTDFQSE MLSSPAGAIW EDFIPGQNME RDEEDNISLQ WLSFFMEDCF 60 SSTTSFNFPT PLIPTKTNNA SNSCATDPYP APLRNPNPCS FQKPSFPAKA RNKRRKTKTS 120 SQFINSSIDS PLLHQKHWLA ESELLISPKM EKNENKPETE DEEKGINGRG VQHQQPKRCS 180 HCLSQRTPQW RTGPLGPKTL CNACGVRFKS GRLLPEYRPA KSPTFVNYKH SNSHKKVMEM 240 RMADFSTNSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 1e-36 | GATA family protein |