PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693971.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 306aa MW: 34949.5 Da PI: 9.7018

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126	1.2e-39	92	151	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s XP_020693971.1 92 PDKILPCPRCKSMDTKFCYFNNYNVNQPRHFCKNCQRYWTEGGSMRNVPVGAGRRKSKSS 151 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MDPVIKLFGK TIQLPAARQG LAATAGEDRS GYEKKFSPTI LRASSKKQGN HEPKHKNEET 60 RFSQQEERID EKNMSEAKAE KNNPMDKTLK KPDKILPCPR CKSMDTKFCY FNNYNVNQPR 120 HFCKNCQRYW TEGGSMRNVP VGAGRRKSKS STTNQYYNHH IRIPDCAQAD FYESNNHPSP 180 LKHNGTVLSF SAEAPLLESM DSNLENQFSR SLATPWPNPW SQTPLYPMAP YLAMPWLCSC 240 RHSTVPKRLR ITEDHEKAAK CSVWEKLGFK NDKTDKIFQT RSAEASQVLC ANPAALSRSL 300 NFQERS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	2e-58	Dof family protein