PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693901.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 134aa    MW: 15186.3 Da    PI: 8.7077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-0536751054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R ++i +++  L++l+ +      +K   a++L  ++eYIk L
  XP_020693901.1 36 KVRKEKIGDRITALQQLVSPF-----GKTATASVLHDTIEYIKFL 75
                    668899*************98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MTAKSSEGIP EKKTSNETEL KKPRIERPSP FPAVFKVRKE KIGDRITALQ QLVSPFGKTA  60
TASVLHDTIE YIKFLHEQVL CTPYLRNLRP TQQEKKSEKS MDEEESTQDL RSRGLCLVPL  120
TSTYSMASDG SDHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21340.11e-36bHLH family protein