PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020693884.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 27399.9 Da PI: 10.0586 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.2 | 5.3e-07 | 109 | 153 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr+RR+r+ ++++ L +l ++ +K +K +i++ A +++L XP_020693884.2 109 HMMRERQRRERLSQSYADLYAILSPS-----TKADKNSIVQTAAALVREL 153 889*******************9887.....8999999999998888777 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MDPFFFPDQD ELQDFWGLSV DPTVDLLDAV TQHLSRPASS MARRSAFSKY TGPIAAPPQA 60 QGSGGGGGGN IHRRIIELLR RIRRGKQESK GGGGGGSSSG GEGSRGFRHM MRERQRRERL 120 SQSYADLYAI LSPSTKADKN SIVQTAAALV RELKGVKEGL QKRNEELMRM AAPAEEMAEG 180 TSSERTEQRI EVEGDRVITV RAENSASAID SVIGALRCLE RMDVKARAIR FAAAAGGGMT 240 GGVMMIETNK GSTQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 114 | 119 | RQRRER |