PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020692966.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 516aa MW: 55847.6 Da PI: 6.8111

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020692966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.3e-40	127	188	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+sss XP_020692966.1 127 PDKVLQCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHSSS 188 78999*****************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MARVDSGGMS EVRDPAIKLF GRKIPLLEEQ PLAEEGGVAD LAQAMLPLKV GEKDTCKEKA 60 NTKVDAMLDA PENLDQNESL SSSGLCHGIE ENQKTATEIA KDAEEPKSEQ DNKESGTSGE 120 DKVLKKPDKV LQCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR 180 RKNKHSSSTY RHTVVMPDAL ASVQVDGSDL SHHEASPCGS STTTRLPLKC NGTVLKFGPE 240 APLCESMTSV LKLGDQKRAS ELGFTTHREN KEEPSCSSSA KVSKHAENGF PEDAEQKALH 300 GYQNGLAPLH HLQCYPVSPW AYAWNPGWSN IAAAAAMAAA GRSPEPLPRQ ENGIPTPISW 360 SRPPMVTAPP FCAPTFPFPL VPTSFWSCIP SWTGGPWNLP LVGNNNRLSP SSSTSNSNCS 420 GNGSPTLGKH CRDATSIGEE NTEKSLWVPK TLRIDDIDEA AKSSIFATLG IKLDEGCLFK 480 AFPSKSQKGE AADAAQLLHA NPAAFSRSQS FQETTT

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MARVDSGGMS EVRDPAIKLF GRKIPLLEEQ PLAEEGGVAD LAQAMLPLKV GEKDTCKEKA  60
NTKVDAMLDA PENLDQNESL SSSGLCHGIE ENQKTATEIA KDAEEPKSEQ DNKESGTSGE  120
DKVLKKPDKV LQCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR  180
RKNKHSSSTY RHTVVMPDAL ASVQVDGSDL SHHEASPCGS STTTRLPLKC NGTVLKFGPE  240
APLCESMTSV LKLGDQKRAS ELGFTTHREN KEEPSCSSSA KVSKHAENGF PEDAEQKALH  300
GYQNGLAPLH HLQCYPVSPW AYAWNPGWSN IAAAAAMAAA GRSPEPLPRQ ENGIPTPISW  360
SRPPMVTAPP FCAPTFPFPL VPTSFWSCIP SWTGGPWNLP LVGNNNRLSP SSSTSNSNCS  420
GNGSPTLGKH CRDATSIGEE NTEKSLWVPK TLRIDDIDEA AKSSIFATLG IKLDEGCLFK  480
AFPSKSQKGE AADAAQLLHA NPAAFSRSQS FQETTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-75	Dof family protein